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Image of message i get when trying to install bcl2fastq2 library to use with the Cellranger 3.0.1 software

screenshot

So I already installed all dependencies and checked them in terminal, but still while trying to install bcl2fast i get this, and i can't figure out what and hot toconfigure to make it install. In image it says in russian "make file not found. Help me please!

I tried to use script from here to install bcl2fast.

I use Ubuntu 18.04 and my computer meets min sysreq for this software!

Thank you further for your help, will wait for any information that can help!

wjandrea
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Dm K
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    Welcome to Ask Ubuntu! [Please don't post pictures of text](https://meta.askubuntu.com/q/8713/301745). Instead, copy the text, [edit] it into your post, and use the formatting tools like [code formatting](https://askubuntu.com/editing-help#code) to make it look nice. To get command line output in English, see instructions [here](https://askubuntu.com/q/264283/301745). It's also important to include the exact command you ran to get that output. – wjandrea Dec 15 '18 at 17:19

1 Answers1

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After spending a couple of hours trying everything...

I solved the issue in Ubuntu 18 downloading the .rpm package from here: bcl2fastq2 Conversion Software v2.20 download

Then converting to a .deb package and installing:

sudo alien bcl2fastq2-v2.20.0.422-Linux-x86_64.rpm
sudo dpkg -i bcl2fastq2_0v2.20.0.422-2_amd64.deb
Jeff
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Oligoelemento
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